Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834024.1_cds_XP_016505442.1_18784
CDS Infomation

[gene=LOC107823331] [db_xref=GeneID:107823331] [protein=putative B3 domain-containing protein REM15] [protein_id=XP_016505442.1] [location=join(4973..5041,5229..5529,5728..5861,6071..6296,6561..6635,6763..6896,7217..7445,7720..7898,8006..8173,8710..8820,9777..9860,9944..10234)] [gbkey=CDS]
Sequence

ATGAAAAAAGTTCCTCCAAAGAAATCTCATTTTTTCAAACCAATTCTGCCTGGTTTCAAG
AATGGCCTTAAAATTCCTGTAGGTTTCTTAAAGTATCTGAAGGGACATGATAATGTACAT
GCAATACTGAGAAGGGGTGGTAAGAAGTGGGTGATGAAGGTGAACGGCCGTCGAATGGAA
GATGGTTGGACAGAGTTTGCAGAAGAGCATGATTTGCAATTGGGAGATATGTTGGTATTT
AGACATGAAGGTAATATGGAGTTTAATGTTTCCATATTTGGTTCAAGTTGTTGTGAGAGA
GAATACGCGGCGTATATGCAAGAAGACGAGGATGAAGAGGAGGAGACTCCCAAGAAATTT
GATTTGGAAGAAAAAGTAAAGGCTAACATCAGGACATCAGGCAAGGCTTTCCCCAATGCA
GAAGCTGCTAATAAGGGCATGCATCTCAGTCCCTCTCATCTCATTTGTACAATCAAACCT
TATTGCCTTACAAAGTATTTTCTGCGCATTCCGAGACAATTTGCACTAGATAACAGACTC
AACAACAGGAAATGCACGATAATTATGAGGGACGAGCTAAGGTCATGGACATGTAGTCTG
CATACAAACGGAAATACCTACATTGGACGTGGATGGCATGAATTCTGCACTGACAAGTGC
TTAAAGGAAGGAGATCGCGTAATGTTTGAGATAGTTTCCAATGGAGAAACACCTATATTT
AAATTTCATGATTTGAGAGGAAATCCATCCCACCATCCTGAAGTAAAGAAGAACAATTTT
GATGCCAAAAGAATCTCAGATGAAGAAAAACCAAAGGCCAACATCAAGGCATCAGACAAG
GCTTTCCCCAATGTAGAAGCTGCTGAAAAGGACAAGCATCTCACTCACTCTCACTTCATT
TGTACAATCAGACCTTATTGCCTTTCAAAACATTTTGTGGCTGTTCCAAGACAATTCGCG
CTGAAAAACAGACTCAACAACAGGAAATGTATGATAATTATAAGGAACGAGCGAAGGTCA
TGGACATTTAGTCTGTATACAAGCAGCAACAACACCTATTTTGGGCGTGGATGGCGTGAA
TTCTGCATTGAGAAGTGCTTAAAGGAAGGAGATCGCGTAATGTTTGAGATAATTTCCAAT
GGTGAAACACCTGTATTTGTATTTCAAGATTTGAGAGGAAGTCCATCCCTCCATCCTGAA
GTAAAGAAGAACTATTTGGATGCTAAAAGAATTAAGACCATGGACGCGACTTCTCCAAAA
GTACAAGTACCTGCTTCAACATCTGCTGATGCTAACCCTCATTTTATATCTACTATTAAA
CCTTACACCATCAAACATCATGTTTTGTATCTTCCATTGGCTTTTGTGAAATCAAATGGC
TTGATGAATAGACACTGTGAGATGATTCTTGTCAATGAAAAACGGAGATCATGGTCAGTG
CAGCTAGGGCAAATGGGACATCACTTTGGAATTAAAAGGGGATGGCGAGAGTTCGTACGA
GCAAATGGTGTTCAAGTATATATTCTGGTAAGGATGCCAAGAATCACACCCTCAGAAGCC
ATTGACAAGATACAGAAGCTGTTGGTGATGGGCAAGGAAACAGGCACTGAAGCAAGTGAA
TACAATAAAATTCTCTCCCCACTGACTGGTTTCTCCAAGCGGCGGTTACGTTTGGCAGGA
ACGGTGGTTGTCAATGGCGAAGGGCAAAAGTTAGTCTCTCAGAAAACACAGGCGGCTGCA
CCATTGGTAGCTCCAGTGGTGGATCAACAAAATGGAAGGAACGACAATGGTAATTTCTCT
CAATCTGATAATTATCTGACACATCTAGTAGAATTGGACAGTAGATTGCCTAAGAATGAT
AGTGGAATGAACAAAGTATTGAGTGAATGTGGGGTTTCATCTTCGAATGTATCGACTATG
GTGCAACCACAACTAAATGCACATGTAGATGAAAATCCGCAGAAATCGATGGCTAACAAA
GATCCAGTAGCTCTGGCGTAG

Peptide Sequence

PEP ID

XP_016505442.1
PEP Infomation

PREDICTED: putative B3 domain-containing protein REM15 [Nicotiana tabacum]
Sequence

MKKVPPKKSHFFKPILPGFKNGLKIPVGFLKYLKGHDNVHAILRRGGKKWVMKVNGRRME
DGWTEFAEEHDLQLGDMLVFRHEGNMEFNVSIFGSSCCEREYAAYMQEDEDEEEETPKKF
DLEEKVKANIRTSGKAFPNAEAANKGMHLSPSHLICTIKPYCLTKYFLRIPRQFALDNRL
NNRKCTIIMRDELRSWTCSLHTNGNTYIGRGWHEFCTDKCLKEGDRVMFEIVSNGETPIF
KFHDLRGNPSHHPEVKKNNFDAKRISDEEKPKANIKASDKAFPNVEAAEKDKHLTHSHFI
CTIRPYCLSKHFVAVPRQFALKNRLNNRKCMIIIRNERRSWTFSLYTSSNNTYFGRGWRE
FCIEKCLKEGDRVMFEIISNGETPVFVFQDLRGSPSLHPEVKKNYLDAKRIKTMDATSPK
VQVPASTSADANPHFISTIKPYTIKHHVLYLPLAFVKSNGLMNRHCEMILVNEKRRSWSV
QLGQMGHHFGIKRGWREFVRANGVQVYILVRMPRITPSEAIDKIQKLLVMGKETGTEASE
YNKILSPLTGFSKRRLRLAGTVVVNGEGQKLVSQKTQAAAPLVAPVVDQQNGRNDNGNFS
QSDNYLTHLVELDSRLPKNDSGMNKVLSECGVSSSNVSTMVQPQLNAHVDENPQKSMANK
DPVALA

Transcript Sequence

Gene sequence data has not been registered.